BouchardLab / process_nwb

Functions for preprocessing timeseries data stored in the NWB format
https://process-nwb.readthedocs.io/en/latest/
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preprocess_folder fails to write processing data for RVG16_B06 using --all_filters #53

Closed jthermiz closed 2 years ago

jthermiz commented 2 years ago

/clusterfs/NSDS_data/nwb/test/RVG16/RVG16_B06/RVG16_B06_org

jthermiz commented 2 years ago

@JesseLivezey Do you have any thoughts as to why this may be happening?

JesseLivezey commented 2 years ago

That's a weird problem. Maybe the h5 file isn't being closed correctly. I can try and reproduce.

jthermiz commented 2 years ago

I'm closing this issue because the problem seemed to go away at least on commit 401590438fbc8e2dad447402eed8c6f20c897806 of the remove_raw branch. I think that this problem was related to the incorrect rate being specified for the wavelet decomp.