arnaudletroter
commented
10 months ago Hi Nicolas Thank you for submitting your project to BrainHack Marseille 2023. Your project is now visible online !
Arnaud for The BHM organization team.
Open NicoWana opened 10 months ago
arnaudletroter
commented
10 months ago Hi Nicolas Thank you for submitting your project to BrainHack Marseille 2023. Your project is now visible online !
Arnaud for The BHM organization team.
Title
Developing a routine to analyse calcium signals
Leaders
Elysa Crozat Jose Jorge Ramirez Franco Nicolas Wanaverbecq
Collaborators
No response
Brainhack Global 2023 Event
Brainhack Marseille
Project Description
- What are you doing, for whom, and why? Calcium signal analysis from neuronal population expressing GCaMP6 (GECaP) For the team research project To monitor and determine neuronal activity and modulation
What makes your project special and exciting? Combining FIJI/Image J package with python code to create a ffull integrated environement
How to get started? Python script to call and use Image J package
Where to find key resources? Image J developer site
Link to project repository/sources
don't have
Goals for Brainhack Global
Combine image J plugins into python code
Good first issues
issue one:
issue two:
Communication channels
Don't know. through Mattermost Brainhack channel
Skills
Python Java Image J
Onboarding documentation
No response
What will participants learn?
To code, generate a analysis suite
Data to use
No response
Number of collaborators
2
Credit to collaborators
Through github depositary
Image
Leave this text if you don't have an image yet.
Type
coding_methods, data_management, pipeline_development
Development status
0_concept_no_content
Topic
data_visualisation, physiology
Tools
other
Programming language
Java, Python
Modalities
other
Git skills
0_no_git_skills
Anything else?
No response
Things to do after the project is submitted and ready to review.
Hi @brainhackorg/project-monitors my project is ready!