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BranniganLab / nougat

Analysis of membrane height, thickness, and curvature
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Unclear orientation of protein #232

Open EzryStIago opened 1 year ago

EzryStIago commented 1 year ago

How do I backmap from a density to the protein structure? e.g. I have enrichment for cholesterol in the lower right of the protein, but where does that density correspond to in the structure? Comparing with volmap results makes me think it's rotated 45 degrees... image image

JesseSandberg commented 10 months ago

run volmap and then run cell_prep. That will show you the exact orientation wrt how qwrap positions the protein in the heatmap.