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BrendelGroup / AEGeAn

Integrated toolkit for analysis and evaluation of annotated genomes
http://brendelgroup.github.io/AEGeAn
ISC License
24 stars 10 forks source link

locuspocus core dump #237

Open vpbrendel opened 4 years ago

vpbrendel commented 4 years ago

Something like

locuspocus -d -l 200 --refine --cds Aaeg.gff3

works fine, but

locuspocus -d -l 200 --refine Aaeg.gff3

will core dump. Input gff3 file does not matter particularly; for all examples I tried, we eventually get

Assertion failed: (!tag_already_used), function gt_tag_value_map_add, file src/extended/tag_value_map.c, line 129. This is a bug, please report it at https://github.com/genometools/genometools/issues Please make sure you are running the latest release which can be found at http://genometools.org/pub/ You can check your version number with gt -version. Aborted (core dumped)