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BrooksLabUCSC / flair

Full-Length Alternative Isoform analysis of RNA
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when -nvrna used caused [ERROR] failed to open file '40' #147

Closed MustafaElshani closed 2 years ago

MustafaElshani commented 3 years ago

[ERROR] failed to open file '40' The "file number" is was the -t arg given, this issue arose with --nvrna arg, # #

Jeltje commented 2 years ago

Thank you! We have been working on that section of the code as well, and I have checked that all mm2_command additions are now added to position 3, which solves the issue. Please check out the current master branch or our latest release.