Hello,
Thank you for developing this tool. I am currently using it at the collapse step. In the promoter (-p) option, I added a bed file with CAGE peaks in it to readjust 5' ends. However, it is currently generating a huge temporary file (.promoter_intersect.bed) (currently at 3 TB) that I did not have when running the same command line without precising the CAGE peaks. I would like to know whether it is normal or not.
Thank you in advance.
Best regards,
Lan Anh
Hello, Thank you for developing this tool. I am currently using it at the collapse step. In the promoter (-p) option, I added a bed file with CAGE peaks in it to readjust 5' ends. However, it is currently generating a huge temporary file (.promoter_intersect.bed) (currently at 3 TB) that I did not have when running the same command line without precising the CAGE peaks. I would like to know whether it is normal or not. Thank you in advance. Best regards, Lan Anh