BrooksLabUCSC / flair

Full-Length Alternative Isoform analysis of RNA
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RGB code issue in .bed12 output for single exons #216

Open suegrimes opened 2 years ago

suegrimes commented 2 years ago

Selected lines of bed12 output from flair collapse, where RGB code (column 9) doesn't seem to be valid (is just an integer) for some single exons, ie lines 1 and 2 below.

1 198753293 198754323 9dbfdfa0-caca-4376-bc12-4af41de0c397;16 60 - 198753293 198754323 2 1 1030, 0, 1 198756408 198757154 25f4ff87-73a2-4b95-8480-b66c8de1e476;16 60 - 198756408 198757154 2 1 746, 0, 1 198639039 198703344 182c0ce1-31d1-48dc-9f02-f9662737419a;0 60 + 198639039 198703344 27,158,119 5 98,116,27,141,47, 0,186,53307,60524,64258, 1 198639039 198703344 03429412-c13d-4966-83d5-f7196770ba46;0 60 + 198639039 198703344 27,158,119 6 98,116,27,141,144,47, 0,186,53307,60524,63347,64258,