adds quoting to handle wildcard characters in filenames

BrooksLabUCSC / flair

Full-Length Alternative Isoform analysis of RNA

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adds quoting to handle wildcard characters in filenames #239

Closed chrisamiller closed 1 year ago

chrisamiller commented 1 year ago

As described in https://github.com/BrooksLabUCSC/flair/issues/238, HLA contigs may contain asterisks that can be inappropriately expanded as wildcards, causing correction to fail. This fixes that issue.