If FLAIR fails to add any splice junctions, possibly due to file format issue, it continues to run with no obvious indication that it is not using this evidence.
Unless one carefully digs through the noise in the log files, this is not obvious and the actually reason is not reported
If FLAIR fails to add any splice junctions, possibly due to file format issue, it continues to run with no obvious indication that it is not using this evidence.
Unless one carefully digs through the noise in the log files, this is not obvious and the actually reason is not reported