BrooksLabUCSC / flair

Full-Length Alternative Isoform analysis of RNA
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Hello, after splitting the BED file by chromosomes, we found that a single chromosome's BED file is 1.03G, which is larger than 1G. Can Flair Collapse currently handle a BED file of 1.03G? #334

Open 991031liurui opened 2 months ago

wdesaintjean commented 1 month ago

I think it's only an advice, because FLAIR consume lot of memory. If you have enough RAM on your computer/sever, you can try. On the server of my team, a bed with a size lightly superior to 1Go worked well .