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BrooksLabUCSC / flair

Full-Length Alternative Isoform analysis of RNA
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DRIMSeq cannot be triggered #373

Open gocrag opened 2 months ago

gocrag commented 2 months ago

I am trying to run diffSplice with multiple samples at two conditions. however, DRIMSeq cannot be triggered. Command is as follows:

flair diffSplice --test -t 12 -i ${bed} -q $countfile -of --conditionA "A" --conditionB "B" -o ${diffSplice_dir}

alexdhill commented 3 weeks ago

Sounds like a replicate of #365, but you should probably share the exact error message