Open Buttonwood opened 10 years ago
RNA-Skim: a rapid method for RNA-Seq quantification at transcript level http://bioinformatics.oxfordjournals.org/content/30/12/i283.full.pdf+html
Li HD, Menon R, Omenn GS, Guan Y. (2014) The emerging era of genomic data integration for analyzing splice isoform function. http://www.rna-seqblog.com/emerging-computational-approaches-that-integrate-rna-seq-data-for-predicting-the-functions-of-alternatively-spliced-isoforms/?utm_source=RNA-Seq+Blog+Subscribers&utm_campaign=f78f05e80b-RSS_EMAIL_CAMPAIGN&utm_medium=email&utm_term=0_e9607034ee-f78f05e80b-85918069
Kalari KR et al. (2014) MAP-RSeq: Mayo Analysis Pipeline for RNA sequencing. BMC Bioinformatics http://www.biomedcentral.com/content/pdf/1471-2105-15-224.pdf
Meng J, Lu Z, Liu H, Zhang L, Zhang S, Chen Y, Rao MK, Huang Y. (2014) A protocol for RNA methylation differential analysis with MeRIP-Seq data and exomePeak R/Bioconductor package. http://www.rna-seqblog.com/a-protocol-for-rna-methylation-differential-analysis-with-merip-seq-data/
Zhao H, Cao F, Gong Y, Xu H, Fei Y, Wu L, Ye X, Yang D, Liu X, Li X, Zhou J. (2014) Stratification of Gene Coexpression Patterns and GO Function Mining for a RNA-Seq Data Series. Biomed Res Int http://www.rna-seqblog.com/stratification-of-gene-coexpression-patterns-and-go-function-mining-for-a-rna-seq-data-series/?utm_source=RNA-Seq+Blog+Subscribers&utm_campaign=f78f05e80b-RSS_EMAIL_CAMPAIGN&utm_medium=email&utm_term=0_e9607034ee-f78f05e80b-85918069
http://www.rna-seqblog.com/bits-wiki-rna-seq-analysis-for-differential-expression/
RNA-Skim: a rapid method for RNA-Seq quantification at transcript level http://bioinformatics.oxfordjournals.org/content/30/12/i283.full.pdf+html
Li HD, Menon R, Omenn GS, Guan Y. (2014) The emerging era of genomic data integration for analyzing splice isoform function. http://www.rna-seqblog.com/emerging-computational-approaches-that-integrate-rna-seq-data-for-predicting-the-functions-of-alternatively-spliced-isoforms/?utm_source=RNA-Seq+Blog+Subscribers&utm_campaign=f78f05e80b-RSS_EMAIL_CAMPAIGN&utm_medium=email&utm_term=0_e9607034ee-f78f05e80b-85918069
Kalari KR et al. (2014) MAP-RSeq: Mayo Analysis Pipeline for RNA sequencing. BMC Bioinformatics http://www.biomedcentral.com/content/pdf/1471-2105-15-224.pdf
Meng J, Lu Z, Liu H, Zhang L, Zhang S, Chen Y, Rao MK, Huang Y. (2014) A protocol for RNA methylation differential analysis with MeRIP-Seq data and exomePeak R/Bioconductor package. http://www.rna-seqblog.com/a-protocol-for-rna-methylation-differential-analysis-with-merip-seq-data/
Zhao H, Cao F, Gong Y, Xu H, Fei Y, Wu L, Ye X, Yang D, Liu X, Li X, Zhou J. (2014) Stratification of Gene Coexpression Patterns and GO Function Mining for a RNA-Seq Data Series. Biomed Res Int http://www.rna-seqblog.com/stratification-of-gene-coexpression-patterns-and-go-function-mining-for-a-rna-seq-data-series/?utm_source=RNA-Seq+Blog+Subscribers&utm_campaign=f78f05e80b-RSS_EMAIL_CAMPAIGN&utm_medium=email&utm_term=0_e9607034ee-f78f05e80b-85918069