For the public, the default pval threshold for significance should be 0.05, instead of the 0.055 we use internally. I'm a little torn on the default LFC to use: I think we should probably use 0 (since using a higher threshold value technically makes the p-value adjustment no longer correct).
For the public, the default pval threshold for significance should be 0.05, instead of the 0.055 we use internally. I'm a little torn on the default LFC to use: I think we should probably use 0 (since using a higher threshold value technically makes the p-value adjustment no longer correct).