fixedbb/cmlm

[QUEST2179]

with updated version, a new error occurs

File "C:\Users\structure\ByProt\testDesignLM.py", line 189, in DesignbyLM designer = Designer(experiment_path=exp_path, cfg=cfg) File "C:\Users\structure\ByProt\byprot\tasks\fixedbb\designer.py", line 59, in init self._initialize() File "C:\Users\structure\ByProt\byprot\tasks\fixedbb\designer.py", line 62, in _initialize pl_task, exp_cfg = utils.load_from_experiment( File "C:\Users\structure\ByProt\byprot\utils__init__.py", line 63, in load_from_experiment pl_module = instantiate_from_config(cfg=cfg.task, group='task', model=cfg.model) File "C:\Users\structure\ByProt\byprot\utils\config.py", line 110, in instantiate_from_config raise KeyError( KeyError: 'fixedbb/cmlm is not a registered class [dict_keys([])].'

[zhengzx-nlp]

this seems strange. I just uploaded a scripts to design for a pdb folder. can you try it at scripts/design_pdb.*?

[QUEST2179]

same error.

python design_pdb.py --experiment_path models/lm_design_esm2_650m_multichain --ckpt "best.ckpt" --pdb_dir test --out_dir output --seed 42 --num_seqs 1 --temperature 0.1 --max_iter 5 Namespace(seed=42, num_seqs=1, experiment_path='models/lm_design_esm2_650m_multichain', ckpt='best.ckpt', pdb_dir='test', out_dir='output', temperature=0.1, strategy='denoise', max_iter=5) Global seed set to 42 Traceback (most recent call last): File "C:\Users\structure\ByProt\design_pdb.py", line 140, in main() File "C:\Users\structure\ByProt\design_pdb.py", line 136, in main generate(args) File "C:\Users\structure\ByProt\design_pdb.py", line 84, in generate model, alphabet, collater, generator = setup_generation(args, args.ckpt) File "C:\Users\structure\ByProt\design_pdb.py", line 39, in setup_generation pl_module, exp_cfg = utils.load_from_experiment( File "C:\Users\structure\ByProt\byprot\utils__init__.py", line 63, in load_from_experiment pl_module = instantiate_from_config(cfg=cfg.task, group='task', model=cfg.model) File "C:\Users\structure\ByProt\byprot\utils\config.py", line 110, in instantiate_from_config raise KeyError( KeyError: 'fixedbb/cmlm is not a registered class [dict_keys([])].'