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CAMEL-MartyPagel / acidoCEST_MachineLearning

GNU General Public License v3.0
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Data file missing #1

Open fxcoudert opened 8 months ago

fxcoudert commented 8 months ago

Hello,

Thank you for publishing your code and data in this repository.

I wanted to have a look at your methodology, but I see from the first notebook I opened (https://github.com/CAMEL-MartyPagel/acidoCEST_MachineLearning/blob/main/Analysis/1-Classification.ipynb) that the main data file is missing: ../clean_data/acido_CEST_MRI_Iopamidol.parquet.gzip

fxcoudert commented 8 months ago

Actually, looking at a second notebook (https://github.com/CAMEL-MartyPagel/acidoCEST_MachineLearning/blob/main/Analysis/3-compare_predictions_regression.ipynb) it seems more data files are missing:

rf = pd.read_csv('../outputs/RF_reg_TEST_pred.csv')
lasso = pd.read_csv('../outputs/lasso_reg_TEST_pred.csv')

I cannot find an outputs/ directory.