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CAMH-Scientific-Computing / SCC

CAMH Specialised Computing Centre
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Wrapper submission scripts "R", "MATLAB", "Python" #56

Open djrotenberg opened 9 years ago

djrotenberg commented 9 years ago

In /quarantine/Batch there are a few scripts to make job submissions easier for users.

For example there is a modified 'pbs_R' script that can take an R script and package it for submission to the queue.

We should create one for each of the popular languages/scripting methods (i.e. R, MATLAB, Python) so that users only need to focus on their code, rather than submission.

pipitone commented 8 years ago

I wonder if this might be more confusing to people because of the magic involved.

It's easy enough to make R scripts "executable" (just put #!/usr/bin/env Rscript as the first line and make it executable), or just have people submit the entire command line (python script.py, etc..).