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CAMI-challenge
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AMBER
AMBER: Assessment of Metagenome BinnERs
https://cami-challenge.github.io/AMBER/
GNU General Public License v3.0
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Old files archive are not correct
#58
SantaMcCloud
opened
6 days ago
1
Bug which make the option genome_coverage not usable
#57
SantaMcCloud
closed
2 weeks ago
1
bug fix such that the option [--genome_coverage] is usable again
#56
SantaMcCloud
closed
2 weeks ago
3
Bump jinja2 from 3.1.2 to 3.1.3
#55
dependabot[bot]
closed
1 month ago
1
mixed dtype for BINID can cause bins with same IDs to be split into separate bins
#54
mattheatley
closed
2 weeks ago
2
Bump pyarrow from 11.0.0 to 14.0.1
#53
dependabot[bot]
closed
1 month ago
1
Updates for AMBER requirements
#52
yazhinia
closed
1 year ago
1
How does mapping work?
#51
yazhinia
closed
1 year ago
4
Evaluating Gold standard encountered RuntimeWarning: overflow
#50
yazhinia
closed
1 year ago
8
ImportError: cannot import name 'Markup' from 'jinja2'
#49
eparisis
closed
1 year ago
2
Bump numpy from 1.18.3 to 1.22.0 in /requirements
#48
dependabot[bot]
closed
1 month ago
1
gold standard mapping column BINID vs binning assignment file
#47
Paupiera
closed
2 years ago
3
Other problem.
#46
zhang570221322
closed
3 years ago
2
a data-related problem
#45
Huangpq2019
closed
3 years ago
1
Issue when running add_length_column.py
#44
polinanvkv
closed
3 years ago
2
amber only considers bins with completeness > 0 ?
#43
dpellow
closed
3 years ago
1
Error creating html - character encoding
#42
dpellow
closed
3 years ago
4
Error in creating html page
#41
rmenegaux
closed
3 years ago
2
Question of the output
#40
psj1997
closed
4 years ago
2
"nan" values in Purity (bp) and Purity (seq)
#39
apcamargo
closed
4 years ago
2
Output metrics bp vs seq.
#38
ohickl
closed
4 years ago
2
Error creating genome binning plots
#37
ohickl
closed
4 years ago
0
a question about AMBER 2.0.21-beta
#36
ziyewang
closed
5 years ago
2
v2.0.17-beta TWO bugs
#35
Ash1One
closed
5 years ago
4
Filter contigs by length
#34
abremges
closed
6 years ago
3
use ensurepip
#33
graingert
closed
6 years ago
3
configure wheels
#32
graingert
closed
6 years ago
0
modernize pip instructions
#31
graingert
closed
6 years ago
2
Improve error message(s)
#30
abremges
closed
6 years ago
2
Add citation info
#29
abremges
closed
6 years ago
2
set the long_description to readme
#28
graingert
closed
1 month ago
0
use python gitignore
#27
graingert
closed
6 years ago
0
rename to ambie, as that's available on PyPI fixes #25
#26
graingert
closed
6 years ago
2
amber package name is already taken on PyPI. Please choose a different name
#25
graingert
closed
6 years ago
2
fix(html): use correct color for heatmap
#24
pbelmann
closed
6 years ago
0
avg precision vs avg recall per base pair
#23
pbelmann
closed
6 years ago
0
Install amber with pip
#22
pbelmann
closed
6 years ago
0
feature improved html
#21
pbelmann
closed
6 years ago
0
fix(html): use different color scale for heatmap
#20
pbelmann
closed
6 years ago
1
Feature colored columns
#19
pbelmann
closed
6 years ago
0
Github.io Page
#18
pbelmann
closed
6 years ago
0
feat(docker): tested docker image
#17
pbelmann
closed
6 years ago
0
Feature/test docker
#16
pbelmann
closed
6 years ago
0
CHANGELOG
#15
pbelmann
opened
6 years ago
0
Create GitHub Page
#14
pbelmann
closed
6 years ago
3
VERSION
#13
pbelmann
closed
6 years ago
1
AMBER in Dockerhub
#12
pbelmann
closed
6 years ago
0
colorized html table
#11
pbelmann
closed
6 years ago
0
feat(html): add contamination completion table
#10
pbelmann
closed
6 years ago
0
HTML Table
#9
pbelmann
closed
6 years ago
0
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