CARTAvis / carta-backend

Source code repository for the backend component of CARTA, a new visualization tool designed for the ALMA, the VLA and the SKA pathfinders.
https://cartavis.github.io/
GNU General Public License v3.0
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Fix incorrect parsing of the ATCA FITS header #1376

Closed markccchiang closed 5 months ago

markccchiang commented 6 months ago

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pford commented 6 months ago

Should the original ctype value VELO-XXX also be unchanged? The issue requested the original header. I think I wrote this code, not sure why I changed the value but maybe a casacore issue at the time.

Also if the SPECSYS header is read before the CTYPE header, then the specsys string will be replaced with the CTYPE value, which is not what we want.

Starting at line 319 in this branch FileExtInfoLoader.cc:

        } else if (value.startsWith("VELO-") && specsys.empty()) {   <== only if not set?
            specsys = value.after('-');
            value = "VELO";     <=== remove this line?
        }
markccchiang commented 6 months ago

I noticed that if I do not remove the string after VELO (from the original VELO-XXX), the x-label of the spectral profile plot can not be shown normally. Like the following snapshot:

截圖 2024-05-16 上午10 11 05

with "CTYPE3 = VELO" the x-label is normally shown:

截圖 2024-05-16 上午10 12 33

Not sure if this is the AST problem, or just the frontend code issue(?) @kswang1029 @TienHao do you have comments on it?

TienHao commented 6 months ago

Not sure if this is the AST problem, or just the frontend code issue(?) @kswang1029 @TienHao do you have comments on it?

Yeah, the frontend code needs to be modified for VELO-XXX. It does not give spectral type name for VELO-XXX.

@kswang1029, do VELO-XXX have the same spectral type name and unit just like VELO? or they should have other names?

kswang1029 commented 6 months ago

Not sure if this is the AST problem, or just the frontend code issue(?) @kswang1029 @TienHao do you have comments on it?

Yeah, the frontend code needs to be modified for VELO-XXX. It does not give spectral type name for VELO-XXX.

@kswang1029, do VELO-XXX have the same spectral type name and unit just like VELO? or they should have other names?

Yes just like VELO. The VELO-XXX is a (old?) way to encode the spectral reference frame. We still refer CUNIT3 for the unit.

pford commented 6 months ago

I approved the code review, and will leave it up to the others whether to keep the change to "VELO" or show the actual CTYPE header value. It sounds like the suffix is outdated, does not add any information since SPECSYS is defined, and requires a workaround for the spectral profile.

TienHao commented 6 months ago

Since the frontend is working with CTYPE3 = VELO in the current PR(no VELO-XXX is sent through headers), I think there is no need to change in the frontend for the spectral type name now.

YuHsuan-Hwang commented 5 months ago

Does this PR still need frontend changes?

kswang1029 commented 5 months ago

Does this PR still need frontend changes?

I will check and report back.

kswang1029 commented 5 months ago

Does this PR still need frontend changes?

No, we do not need a corresponding frontend change. 👍

kswang1029 commented 5 months ago

@confluence ready to merge after fixing the changelog conflict.

github-actions[bot] commented 5 months ago

Code Coverage

Package Line Rate Health
src.Cache 72%
src.DataStream 44%
src.FileList 67%
src.Frame 36%
src.HttpServer 42%
src.ImageData 28%
src.ImageFitter 83%
src.ImageGenerators 43%
src.ImageStats 75%
src.Logger 37%
src.Main 52%
src.Region 69%
src.Session 4%
src.Table 52%
src.ThreadingManager 67%
src.Timer 85%
src.Util 40%
Summary 46% (8618 / 18802)