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CASCI-lab / CANA

CANAlization: Control & Redundancy in Boolean Networks
https://casci-lab.github.io/CANA/
MIT License
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Combining Sensitivity and Activity computations #8

Closed rionbr closed 1 year ago

rionbr commented 5 years ago

From Luis M. Rocha: it would be great if activity could be directly calculated by changing the aggregation operator in the existing code---at least comments should say that in the edge redundancy function, AVG yields redundancy (and indirectly effectiveness, via 1-redundancy), and MAX yields activity. Then sensitivity would be computed (with a different function) by summing the activities of all inputs, as much as effective connectivity can be computed by summing the effectiveness of all inputs---though it can also be computed via eq. 1 where MAX must be used.

austin-marcus commented 1 year ago

I believe Felipe's fork (https://github.com/fcphysics/CANA) implements this feature.

austin-marcus commented 1 year ago

Implemented by #30.