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CAST-genomics
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hla_typing
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R code (final step) integration with workflow
#14
AndrewPHodges
opened
1 year ago
0
Update notebook runner using git code with provided hg38.bed, alleles.gen.fasta, and other depends
#13
AndrewPHodges
opened
1 year ago
0
Review pysam streaming method with Arya
#12
AndrewPHodges
opened
1 year ago
0
Move alleles.gen.fasta import and indexing to pre-parallelization stage
#11
AndrewPHodges
opened
1 year ago
0
Revise chr6 sub-selector step for samtools view with bed file
#10
AndrewPHodges
opened
1 year ago
1
Add alleles.gen.fasta to CAST github
#9
AndrewPHodges
opened
1 year ago
1
Workbook for tandem running using git-code import
#8
AndrewPHodges
opened
1 year ago
1
80-sample test case
#7
AndrewPHodges
opened
1 year ago
0
Cost estimate based on basic sample runner workbook
#6
AndrewPHodges
opened
1 year ago
0
Nextflow parallelization branch
#5
AndrewPHodges
opened
1 year ago
0
Git code made public, added Matteo on admin
#4
AndrewPHodges
opened
1 year ago
0
Rough cost estimate - single-sample example
#3
AndrewPHodges
opened
1 year ago
0
Initial sample run
#2
AndrewPHodges
opened
1 year ago
0
Basic sample runner workbook
#1
AndrewPHodges
opened
1 year ago
0