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CATH-summer-2017
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django_CATH
A data browser for the CATH database.
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#2
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shouldsee
opened
7 years ago
shouldsee
commented
7 years ago
For the structural browser:
[ ] Cache javascripts to local and deposit license
[ ] Directly retrieve pdb from CATH-API (Is this necessary at all?)
[ ] Refactor dbscripts to allow calls with arguments
[ ] Fix CORS (cross origin resource sharing) for 3dmol visualiser
[ ] Rename the alias from "tst" to "django_CATH"
[ ] Add tests for data sanitisation routine
get_something( sanitising = 1)
.
[ ] Better UI: allowing hiding a single node with middle click.
For the ISS browser:
[x] Re-run the statistics using clustered CATH sequence (S40)
[x] Load a full CATH hierarchy [Sep.21]()
[ ] Replace ISS_norm with the estimated database size (or expected number)
Visualisation matters:
[ ] Fake a parent object for each init__ function
[ ] Allow for dynamic computation of ISS_norm (aka lower the bar to enrich the result set).
[ ] Easier access to SSAP score.
[ ] CCXhit for crosshit DB
Tests are the best:
[ ] for /ConXhit/ pages
[ ] for /CCXhit/ pages
[ ] for /hitlist_compare/ pages
[ ] for param2dict() functions
For the structural browser:
get_something( sanitising = 1)
.For the ISS browser:
Visualisation matters:
Tests are the best: