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Cases with bad Cathedral performance
#9
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shouldsee
opened
6 years ago
shouldsee
commented
6 years ago
Cathedral failed to identify good chopping for 5a7dQ. Cathedral incorrectly uses 1xqrA00 and 2hldH02 as templates in
DomChop
Searching CATH with manually chopped structures yield: "query" "hit" "SSAP" "RMSD" "residue_boundary" 5a7dQ01 1t6uD00 84.9 3.8 343-483 5a7dQ02 1ho8A02 82.4 2.8 484-593
Seaching CATH with the whole chain of 5a7dQ still yield 1t6uD00 and 1ho8A02 as
hits
Domchop version of Cathedral seems different from the one used for structrual search CATH
page
.