But when I want to skeletonize it using:
skeletonize.skeletonize_mesh(mesh,invalidation_d=12000)
But I get the following error related to pyembree:
~/anaconda3/lib/python3.8/site-packages/trimesh/ray/ray_pyembree.py in <module> 25 try: 26 # try the preferred wrapper which installs from wheels ---> 27 from embreex import rtcore_scene 28 from embreex.mesh_construction import TriangleMesh 29 # pass embree floats as 32 bit ModuleNotFoundError: No module named 'embreex'
I've been trying to get the pyembree package but it won't install, also using the following command:
conda install -c conda-forge pyembree
Could you provide some details regarding it's intallation or maybe suggest a workaround for the skeletonization?
I'm now trying to skeletonize the downloaded meshes using the given example:
`from meshparty import trimesh_io mm = trimesh_io.MeshMeta( cv_path = "precomputed://gs://neuroglancer-public-data/kasthuri2011/ground_truth", disk_cache_path = "test_meshes", map_gs_to_https=True)
load a segment
mesh = mm.mesh(seg_id = 3710)`
But when I want to skeletonize it using:
skeletonize.skeletonize_mesh(mesh,invalidation_d=12000)But I get the following error related to pyembree:~/anaconda3/lib/python3.8/site-packages/trimesh/ray/ray_pyembree.py in <module> 25 try: 26 # try the preferred wrapper which installs from wheels ---> 27 from embreex import rtcore_scene 28 from embreex.mesh_construction import TriangleMesh 29 # pass embree floats as 32 bit ModuleNotFoundError: No module named 'embreex'I've been trying to get the pyembree package but it won't install, also using the following command: conda install -c conda-forge pyembree
Could you provide some details regarding it's intallation or maybe suggest a workaround for the skeletonization?
Thanks a lot for your help. Jon