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CBICA / CaPTk

Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk
https://www.cbica.upenn.edu/captk
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multimodal registration PET/MRI #1411

Closed xav69ier closed 3 years ago

xav69ier commented 3 years ago

I aim at co-registering classical 4xMRI (T1/T2/T1CE/FLAIR) with 1xPET (PET scans have a companion CT for attenuation correction). The BRATS pipeline offers co-registration for the first set (MRI). I wonder how to enlarge that pipeline to include multimodal co-registration. I guess I should co-register PET > CT > T1CE > SRI-24 (https://www.nitrc.org/projects/sri24/) to end up with a set of 6 co-registered images (instead of the 4x of the BRATS pipeline).

Many thanks in advance for any ideas xavier

sarthakpati commented 3 years ago

Hi @xav69ier,

Thank you for your interest in CaPTk!

I would recommend doing a rigid registration of PET/CT > T1CE > SRI.

Reopen this issue or post in discussion if you have more questions!

Cheers, Sarthak