CBICA / CaPTk

Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk
https://www.cbica.upenn.edu/captk
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FeatureExtraction: The input images and mask are not defined in the same physical space #1457

Open xupengfei1009 opened 2 years ago

xupengfei1009 commented 2 years ago

We'd like to ask a question. In our study, CaPTk was used to produce the computer-aided segmentation labels ,and manual revisions/corrections were applied to the computer-aided segmentation labels in 3Dslicer. Then we extracted radiomic features in batch mode of FeatureExtraction. However,the following error occurred.

Manual revisions/corrections applied in the computer-aided segmentation labels "The size in dimension[0] of the image_1 (/home/Aldult_IDH_WT_GBM/ZS_004/T1_to_SRI_brain_SS_hi.nii.gz) and image_2 (/home/Aldult_IDH_WT_GBM/ZS_004/brainTumorSegmentation_Manual_revision.nii.gz) doesn't match. The input images and mask are not defined in the same physical space; SubjectID: 'ZS_004'"

sarthakpati commented 2 years ago

Thank you for your interest in CaPTk.

Please provide ALL information requested in bug report, otherwise it is almost impossible for us to debug or reproduce errors. There is a reason why the bug report template exists:

**Describe the bug**
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**To Reproduce**
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4. See error

**Expected behavior**
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**CaPTk Version**
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 - Version (including Build information, if any): [e.g. Fedora 22 or Windows 10.1803]

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It would also be great if you can provide at least one example image and generated mask.