CBICA / CaPTk

Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk
https://www.cbica.upenn.edu/captk
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[BraTSPipeline] Move brain-masked image write to Skull Stripping instead of Brain Tumor step #1493

Closed AlexanderGetka-cbica closed 2 years ago

AlexanderGetka-cbica commented 2 years ago

Fixes #1492

Simply moves the step of writing out the brain-masked images up slightly, to the end of the Skull Stripping step instead of the beginning of the Brain Tumor step.

(ignore my branch name, i used the wrong branch for this but it doesn't matter)