Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk
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I'm trying to duplicate in 1.9.0 work that a former colleague ran but I'm having a lot of trouble. I can't find his lattice files so I'm trying to start with the defaults. But that's very confusing, as there are 2 parameter files, and there's a lot of overlap between 1_params_default.csv and 2_params_default_lattice.csv. Is there just a single file I can use as a starter? Specifically, it's warning me that collages take a long time to run, but I can't find the setting to not run them.
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Is your feature request related to a problem? Please describe. A clear and concise description of what the problem is. Ex. I'm always frustrated when [...] I'm trying to duplicate in 1.9.0 work that a former colleague ran but I'm having a lot of trouble. I can't find his lattice files so I'm trying to start with the defaults. But that's very confusing, as there are 2 parameter files, and there's a lot of overlap between 1_params_default.csv and 2_params_default_lattice.csv. Is there just a single file I can use as a starter? Specifically, it's warning me that collages take a long time to run, but I can't find the setting to not run them.
Describe the solution you'd like A clear and concise description of what you want to happen.
Describe alternatives you've considered A clear and concise description of any alternative solutions or features you've considered.
Additional context Add any other context or screenshots about the feature request here.