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CBICA / CaPTk

Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk
https://www.cbica.upenn.edu/captk
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Opening very large file wedges machine #753

Closed eac-upenn closed 4 years ago

eac-upenn commented 4 years ago

Dragged http://www.dclunie.com/pixelmedimagearchive/upmcdigitalmammotomocollection/index.html

. . . \MammoTomoUPMC_Case2\Case2 [Case2]\20071120 080520 [ - MAMMOGRAM DIGITAL SCR BILAT]\Series 73200000 [MG - R MLO Breast Tomosynthesis Image]\1.3.6.1.4.1.5962.99.1.2280943358.716200484.1363785608958.406.0.dcm

919,574 KB

into Captk window.

Machine became unresponsive, even to ctrl-alt-del, needed hard power cycle.

EDIT: Dragged 159,000KB Nifti that resulted from converting that Dicom to Nifti (converted by Captk) and same crash resulted.

Expected Behavior

Doesn't do that.

Desired Behavior

It's okay if I can't do that, it would be better if it failed more gracefully,

Specifications

ashishsingh18 commented 4 years ago

@eac-upenn I am able to load the image into CaPTk on my machine. Since the image is big it takes time to load but eventually the image shows up. However my machine has 32GB RAM.

eac-upenn commented 4 years ago

Good to know. Yeah, it’s fine if it doesn’t load on a smaller machine, but it needs to fail more gracefully.

— Eric.

Eric A. Cohen | Eric.Cohen@pennmedicine.upenn.edu Data Analyst Computational Breast Imaging Group University of Pennsylvania

From: Ashish Singh notifications@github.com Sent: Monday, December 16, 2019 12:37 PM To: CBICA/CaPTk CaPTk@noreply.github.com Cc: Cohen, Eric Eric.Cohen@pennmedicine.upenn.edu; Mention mention@noreply.github.com Subject: [External] Re: [CBICA/CaPTk] Opening very large file wedges machine (#753)

@eac-upennhttps://github.com/eac-upenn I am able to load the image into CaPTk on my machine. Since the image is big it takes time to load but eventually the image shows up. However my machine has 32GB RAM.

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHubhttps://github.com/CBICA/CaPTk/issues/753?email_source=notifications&email_token=AKJWISKZ6EKXF6BRIJXPWILQY64FTA5CNFSM4JZR43P2YY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOEG7PVEQ#issuecomment-566164114, or unsubscribehttps://github.com/notifications/unsubscribe-auth/AKJWISM5YOEHYBLOCD4MP73QY64FTANCNFSM4JZR43PQ.