Open CH2-Carbene opened 2 years ago
Same problem, emm ...
hey bro,I have a question, can you help me ?In the Muse_Software_Manual.pdf, Where is the muse-3.0.0-source.tar.gz in the configuration?
replace?
DeepMRSeg is better?
Hi, looking at the error message, this seems like due to one of the registrations failing. It's difficult to track this further. One very fast solution would be to use DLMUSE, our deep-learning-based registration that runs in seconds. DLMUSE is trained on a large set of curated MUSE labels and was validated on large samples. Please let me know if you would want to try it. We also have an AWS portal to run your data on the cloud. This may be used directly without installation
Hi, I want to try!!!!thank U!!!!!!!!
I will send you the link for the portal and the container tomorrow.
Thank you for your interest!
I receive your reply, I am particularly happy, and I am very happy that you and I recommend DLMUSE. I have another question. Is this DLMUSE a modification based on the basis of MUSE?
It's a DL model that was trained on labels generated using regular MUSE. It provides same set of ROIs. The paper with all details will be hopefully out soon.
Hi, are you free now?
I will send you the link for the portal and the container tomorrow.
Hi ,Are you free now?
Sorry, I was late to reply. Can you please use the following link: https://github.com/CBICA/niCHARTPipelines This will provide you a complete application for segmenting ROIs from a raw T1 (it includes DL based ICV segmentation + DLMUSE)
Best Regards, Guray
On Mon, Oct 23, 2023 at 8:58 AM haiou Li @.***> wrote:
I will send you the link for the portal and the container tomorrow.
Hi ,Are you free now?
— Reply to this email directly, view it on GitHub https://github.com/CBICA/MUSE/issues/4#issuecomment-1775137997, or unsubscribe https://github.com/notifications/unsubscribe-auth/AM4JINQMQ36OMCY2U6IJX7LYAZSZBAVCNFSM6AAAAAARMUIGTKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTONZVGEZTOOJZG4 . You are receiving this because you were assigned.Message ID: @.***>
-- Guray Erus, PhD
Director of Research Artificial Intelligence in Biomedical Imaging Lab University of Pennsylvania Richards Building, 7th Floor 3700 Hamilton Walk Philadelphia, PA 19104
I can use the link!!! I will try~Thank U~
Hi experts,
We tried to install the MUSE in our docker. However, there's no result in target dictionary. Can you give me some advice to figure out this problem?
Best
The output of muse command shows that:
When checking
--------> RUNNING REGISTRATION WITH TEMPLATE13 at Sun Oct 23 05:31:14 UTC 2022 LOGFILE: /opt/sbia/dramms-1.4.1/muse_log_files/muse-dramms-registrations-Template13-23877.log
The log shows that: