Installation error

[ashishsingh18]

I am getting the following on installation. Possibly a result of #158

...snip Installing collected packages: Pillow, wheel, scikit-learn, NiBAx Attempting uninstall: Pillow Found existing installation: Pillow 8.4.0 Uninstalling Pillow-8.4.0: Successfully uninstalled Pillow-8.4.0 Attempting uninstall: wheel Found existing installation: wheel 0.36.2 Uninstalling wheel-0.36.2: Successfully uninstalled wheel-0.36.2 Attempting uninstall: scikit-learn Found existing installation: scikit-learn 0.24.2 Uninstalling scikit-learn-0.24.2: Successfully uninstalled scikit-learn-0.24.2 Running setup.py develop for NiBAx ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. ppscore 1.2.0 requires scikit-learn<1.0.0,>=0.20.2, but you have scikit-learn 1.0.2 which is incompatible. dtale 1.61.1 requires scikit-learn==0.24.2; python_version > "3.0", but you have scikit-learn 1.0.2 which is incompatible.

[ashishsingh18]

@AbdulkadirA @melhemr Do you see this on your side?

[melhemr]

@AbdulkadirA @melhemr Do you see this on your side?

This is one of the issues that was happening with our end user, Lasya, yesterday. Still waiting to hear back on whether it was resolved for her.

[ashishsingh18]

When I do re-installation in the same conda environment, I don't get that error.

[AbdulkadirA]

@ashishsingh18 Thanks for reporting this. The issue is caused by dtale and ppscore, it seems. Are you getting the error when you install NiBAx into a fresh environment? What Python version? I only tested pip install not conda. Does it work with pip?

[AbdulkadirA]

@ashishsingh18, @melhemr Please try the new build environment proposed in #165. Installation from Github is as follows:

python -m pip install -U git+https://github.com/CBICA/NiBAx.git@refs/pull/165/head

Installation of a development version requires two steps. The second step will install the executable main function.

python -m pip install -U -e .
poetry install

[melhemr]

Hello Ahmed,

The first two commands you've provided worked as expected, no errors. This is in an entirely new environment. When I tried running poetry install​​​ I got the attached error message. Is there something I missed?

Thanks, Randa

---

From: Ahmed Abdulkadir @.> Sent: Friday, February 18, 2022 4:08 AM To: CBICA/NiBAx @.> Cc: Melhem, Randa @.>; Mention @.> Subject: [External] Re: [CBICA/NiBAx] Installation error (Issue #161)

@ashishsingh18https://github.com/ashishsingh18, @melhemrhttps://github.com/melhemr Please try the new build environment proposed in #165https://github.com/CBICA/NiBAx/pull/165. Installation from Github is as follows:

python -m pip install -U @.***/pull/165/head

Installation of a development version requires two steps. The second step will install the executable main function.

python -m pip install -U -e . poetry install

— Reply to this email directly, view it on GitHubhttps://github.com/CBICA/NiBAx/issues/161#issuecomment-1044186095, or unsubscribehttps://github.com/notifications/unsubscribe-auth/ATRQL4NWXZ4I6ECRZVIYNOLU3YEAVANCNFSM5MNZN7DA. Triage notifications on the go with GitHub Mobile for iOShttps://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675 or Androidhttps://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub. You are receiving this because you were mentioned.Message ID: @.***>