Closed melhemr closed 2 years ago
@melhemr Thanks. The correct version of neuroHarmonize should be installed automatically:
diff --git a/pyproject.toml b/pyproject.toml
index 9537161..a215d8b 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -71,11 +71,9 @@ requires = ['cycler==0.10.0',
'matplotlib>=3.4.2',
'nibabel==3.2.1',
'numpy>=1.21',
-'neuroHarmonize==2.1',
+'git+https://github.com/rpomponio/neuroHarmonize@refs/pull/20/head#egg=neuroHarmonize',
'pandas==1.3.4',
'Pillow>=9.0.0',
-'poetry>=1.1.13',
-'poetry_core>=1.0.7',
'pyparsing==2.4.7',
'PyQt5>=5.15.4',
'PyQt5_Qt5==5.15.2',
@@ -104,7 +102,7 @@ MarkupSafe = "2.0.1"
matplotlib = "^3.4.2"
nibabel = "^3.2.1"
numpy = "^1.21"
-neuroHarmonize = "2.1"
+neuroHarmonize = { git = "https://github.com/rpomponio/neuroHarmonize.git", branch = "refs/pull/20/head" }
pandas = "1.3.4"
Pillow = "^9.0.0"
poetry = "^1.1.13"
diff --git a/requirements.txt b/requirements.txt
index 7d62042..b02aae5 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -3,7 +3,7 @@ joblib==1.0.1
matplotlib>=3.4.2
nibabel==3.2.1
numpy>=1.21
-neuroHarmonize==2.1
+git+https://github.com/rpomponio/neuroHarmonize@refs/pull/20/head
pandas==1.3.4
Pillow>=9.0.0
poetry>=1.1.13
PR will update OOS harmonization in the GUI to use Combat-GAM
Requires neuroHarmonize PR package:
python -m pip install -U git+https://github.com/rpomponio/neuroHarmonize@refs/pull/20/head