Residuals produced during out-of-sample harmonization are not correct

CBICA / niCHART

The neuro-imaging brain aging chart [niCHART] is a comprehensive solution to analyze standard structural and functional brain MRI data across studies. [niCHART] and the associated pre-processing tools implement computational morphometry, functional signal analysis, quality control, statistical harmonization, data standardization, interactive visual

https://cbica.github.io/niCHART/

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Residuals produced during out-of-sample harmonization are not correct #227

Closed ashishsingh18 closed 2 years ago

ashishsingh18 commented 2 years ago

@melhemr Can you please add steps to reproduce this issue?

melhemr commented 2 years ago

1) Load /NiBAx/testing/Data/synthetic_MUSE_ROI_dataset.pkl.gz 2) Load iSTAGING MUSE harmonization model v1.3 from iSTAGING project on the cluster 3) Apply harmonization model to data 4) Click 'Add to DataFrame' button 5) Click 'Show Data'

The result is changing residuals and missing residuals

AbdulkadirA commented 2 years ago

Fixed by #231