Open kelly-sovacool opened 9 months ago
biowulf deprecates module versions over time, which breaks our pipelines. switching to containers will make this pipeline more robust.
We're already using a container for the TOBIAS rules, so this should be fairly straightforward.
https://github.com/CCBR/CCBR_tobias/blob/94784d877a38bd45d00830407e50cab1b62a606c/config/config.yaml#L19-L20
https://github.com/CCBR/CCBR_tobias/blob/94784d877a38bd45d00830407e50cab1b62a606c/tobias.snakefile#L186
biowulf deprecates module versions over time, which breaks our pipelines. switching to containers will make this pipeline more robust.