Open kopardev opened 6 months ago
@kelly-sovacool:
For differential analysis, use dataset 1 and pick two time points. Check out the paper to compare results.
For all, compare peak calls to Encode peaks (macs2)
1. TF narrow peaks CTCF in human
2. TF narrow peaks JUN in human
3. H3K4me3 narrow promoter peaks in human
4. H3K27ac enhancer (mixed=narrow+broad) peaks in human
5. H3K36me3 broad peaks in human associated with heterochromatin