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CCBR / CHARLIE

Circrnas in Host And viRuses anaLysis pIpEline for Detection Annotation Quantification of circRNAs
https://ccbr.github.io/CHARLIE/
MIT License
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add option for different tmp-dir #106

Closed kelly-sovacool closed 2 weeks ago

kelly-sovacool commented 4 months ago

eg from renee --tmp-dir /scratch/cluster_scratch/$USER

or on FRCE should it actually be /scratch/local

also see implementation in XAVIER

kelly-sovacool commented 4 months ago

strategy: just set it in the config file, don't bother with a CLI flag until we refactor the CLI.