CCBR / CRISPIN

CRISPR screen pipeline
https://ccbr.github.io/CRISPIN/
MIT License
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Optional process to download/update libraries #8

Closed kelly-sovacool closed 1 year ago

kelly-sovacool commented 1 year ago

https://sourceforge.net/p/mageck/wiki/libraries/

could be a subcommand of the CLI, implemented as a subworkflow in nextflow with e.g. -entry download_libs

kelly-sovacool commented 1 year ago

Users should probably do this manually as they'll likely only need one specific library for their dataset