feat: create ccbr_macs2 Docker

CCBR / Dockers

A collection of Dockerfiles to facilitate reproducibility across computing environments.

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feat: create ccbr_macs2 Docker #10

Closed kelly-sovacool closed 1 year ago

kelly-sovacool commented 1 year ago

@kopardev

Uses nciccbr/ccbr_ubuntu_base_20.04, which includes bedtools for #8
Also will satisfy #7

p.s. I'm intentionally not using keywords for those issues here, as they won't be resolved until the container is pushed to DockerHub.

p.p.s. I don't have push access to this repo so I had to fork it.

kelly-sovacool commented 1 year ago

Question: does macs2 work with python3?

Answer: yes, per the docs!

kopardev commented 1 year ago

included in https://github.com/CCBR/Dockers/commit/03dc2a0851991c2e2072ac95f1703ec7132bdd96

kopardev commented 1 year ago

@kelly-sovacool use nciccbr/ccbr_macs2_2.2.9.1:v1 docker

kopardev commented 1 year ago

@kelly-sovacool BTW your Dockerfile worked as-is 👏

kelly-sovacool commented 1 year ago

@kopardev could we simplify that docker name to just ccbr_macs2? (https://github.com/CCBR/Dockers/issues/7) Or do you anticipate we'll never use a different minor/patch version of macs2?