Add rsem_data_matrix rule to output data matrices for genes & isoforms as DEG_ALL/RSEM.genes.expected_count.all_samples.matrix and DEG_ALL/RSEM.isoforms.expected_count.all_samples.matrix. This info is already contained in DEG_ALL/RSEM.isoforms.expected_count.all_samples.txt, but some users need RSEM's matrix format for downstream tools.
Issues
resolves #137
PR Checklist
(~Strikethrough~ any points that are not applicable.)
[x] This comment contains a description of changes with justifications, with any relevant issues linked.
[x] Update docs if there are any API changes.
[x] Update CHANGELOG.md with a short description of any user-facing changes and reference the PR number. Guidelines: https://keepachangelog.com/en/1.1.0/
Changes
Add
rsem_data_matrixrule to output data matrices for genes & isoforms asDEG_ALL/RSEM.genes.expected_count.all_samples.matrixandDEG_ALL/RSEM.isoforms.expected_count.all_samples.matrix. This info is already contained inDEG_ALL/RSEM.isoforms.expected_count.all_samples.txt, but some users need RSEM's matrix format for downstream tools.Issues
resolves #137
PR Checklist
(~Strikethrough~ any points that are not applicable.)
CHANGELOG.mdwith a short description of any user-facing changes and reference the PR number. Guidelines: https://keepachangelog.com/en/1.1.0/