Fixes permissions issues with scripts directory, which created a problem with rNA report. Updated the output file name for reports and removed working directory paths which are not needed.
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[x] This comment contains a description of changes with justifications, with any relevant issues linked.
~- [ ] Update docs if there are any API changes.~
[ ] Update CHANGELOG.md with a short description of any user-facing changes and reference the PR number. Guidelines: https://keepachangelog.com/en/1.1.0/
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CHANGELOG.md
with a short description of any user-facing changes and reference the PR number. Guidelines: https://keepachangelog.com/en/1.1.0/