Add Integration test for Metaboscape with ion mobility

CCMS-UCSD / GNPS_Workflows

Public Workflows at GNPS

https://gnps.ucsd.edu/

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Closed mwang87 closed 5 years ago

mwang87 commented 5 years ago

TODO: find link

lfnothias commented 5 years ago

Wait that link is actually an issue with MZMine-based FBMN

lfnothias commented 5 years ago

The issue is addressed here #74

lfnothias commented 5 years ago

This job can serve as test job. Note that this is only one sample and no metadata.

Also, there is no more the ".d" extension at the end of the sample name, compare to the previous version.

lfnothias commented 5 years ago

Fixed the path to the MetaboScape #84

lfnothias commented 5 years ago

Yay ! The code deployed on proteomics2 is functional and I checked data/output consistency: https://proteomics2.ucsd.edu/ProteoSAFe/status.jsp?task=6aea1f4af97c4e579e1f6358fd0c5e76