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Public Workflows at GNPS
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Error adding cdf file to MASSIVE #701

Closed mabelgon88 closed 3 years ago

mabelgon88 commented 3 years ago

Describe the bug I haven't been able to add two files to a MASSIVE dataset after several tries. The file was converted to CDF format using the chemstation file conversion tool, so I don't understand why the error says unknown filetype.

To Reproduce Steps/Task to reproduce the behavior:

  1. Go to https://massive.ucsd.edu/ProteoSAFe/status.jsp?task=c6b1e799d80b4d99b1505754d46f2b8e
  2. Job Failed

Expected behavior I expect to know the explanation of the error. PEAK-00000.CDF has an unknown filetype (.cdf). Tool execution terminates abnormally with exit code [1]. If is possible correct this error.

Screenshots If applicable, add screenshots to help explain your problem.

Additional context This file was run in the same instrument and batch that the other files and converted with the same tool of ChemStation.

mwang87 commented 3 years ago

It’s not an accepted file type for peak. Put in raw and should be fine.

On Sat, Mar 13, 2021 at 7:29 PM Mabel Gonzalez @.***> wrote:

Describe the bug I haven't been able to add two files to a MASSIVE dataset after several tries. The file was converted to CDF format using the chemstation file conversion tool, so I don't understand why the error says unknown filetype.

To Reproduce Steps/Task to reproduce the behavior:

  1. Go to https://massive.ucsd.edu/ProteoSAFe/status.jsp?task=c6b1e799d80b4d99b1505754d46f2b8e
  2. Job Failed

Expected behavior I expect to know the explanation of the error. PEAK-00000.CDF has an unknown filetype (.cdf). Tool execution terminates abnormally with exit code [1]. If is possible correct this error.

Screenshots If applicable, add screenshots to help explain your problem.

Additional context This file was run in the same instrument and batch that the other files and converted with the same tool of ChemStation.

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