search

CCMS-UCSD / GNPS_Workflows

Public Workflows at GNPS
https://gnps.ucsd.edu/
Other
52 stars 43 forks source link

[GNPS-GC] Not all nodes present top hits #733

Open helenamrusso opened 3 years ago

helenamrusso commented 3 years ago

Description of the bug Not all nodes with library matches present a "Top library match", and therefore, these will not present Compound_Name in the Cytoscape visualization.

Link to GNPS job https://gnps.ucsd.edu/ProteoSAFe/status.jsp?task=2a90d62565af47aea219c8147a3d1f9d

To Reproduce

  1. Considering, for instance, cluster index 4;
  2. Cluster index 4 presents 20 library matches;
  3. Out of the 20 library matches, cluster index 4 doesn't have a top hit;
  4. No annotation can be seen in the molecular network for cluster index 4.

Expected behavior All nodes are expected to have a top hit.

Screenshots image

Additional context I cloned the job to check if this bug persists, and it does.