CCMS-UCSD / GNPS_Workflows

Public Workflows at GNPS
https://gnps.ucsd.edu/
Other
52 stars 43 forks source link

[foodmasst] prevent error if food metadata file not generated #755

Closed ka-west closed 3 years ago

ka-west commented 3 years ago

foodmasst error: Failed: java.lang.IllegalArgumentException: Source file (/scratch/beta-proteomics2/6337878c9f0d448d8e74040b8f3d7c9c/foodomics_track/filtered_food_metadata_file/18b450b4141b471cb7d61f4b0f6baa7e.tsv) does not exist.

job: https://proteomics2.ucsd.edu/ProteoSAFe/status.jsp?task=6337878c9f0d448d8e74040b8f3d7c9c

@robinschmid

ka-west commented 3 years ago

Fixed. https://proteomics2.ucsd.edu/ProteoSAFe/status.jsp?task=36d5c5c461944ae0bf3a238b12f386d3