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CCMS-UCSD / GNPS_Workflows

Public Workflows at GNPS
https://gnps.ucsd.edu/
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[FBMN MZmine] Direct submission fails #819

Closed robinschmid closed 2 years ago

robinschmid commented 2 years ago

Direct submission from MZmine to FBMN on GNPS fails with SSL exception:

@mwang87 did you change anything?

2022-02-25 14:57:17 WARNING io.github.mzmine.modules.io.export_features_gnps.fbmn.GnpsFbmnExportAndSubmitTask submit GNPS submit failed
javax.net.ssl.SSLHandshakeException: Received fatal alert: handshake_failure
    at java.base/sun.security.ssl.Alert.createSSLException(Alert.java:131)
    at java.base/sun.security.ssl.Alert.createSSLException(Alert.java:117)
    at java.base/sun.security.ssl.TransportContext.fatal(TransportContext.java:358)
    at java.base/sun.security.ssl.Alert$AlertConsumer.consume(Alert.java:293)
    at java.base/sun.security.ssl.TransportContext.dispatch(TransportContext.java:204)
    at java.base/sun.security.ssl.SSLTransport.decode(SSLTransport.java:172)
    at java.base/sun.security.ssl.SSLSocketImpl.decode(SSLSocketImpl.java:1500)
    at java.base/sun.security.ssl.SSLSocketImpl.readHandshakeRecord(SSLSocketImpl.java:1415)
    at java.base/sun.security.ssl.SSLSocketImpl.startHandshake(SSLSocketImpl.java:450)
    at java.base/sun.security.ssl.SSLSocketImpl.startHandshake(SSLSocketImpl.java:421)
    at org.apache.http.conn.ssl.SSLConnectionSocketFactory.createLayeredSocket(SSLConnectionSocketFactory.java:396)
    at org.apache.http.conn.ssl.SSLConnectionSocketFactory.connectSocket(SSLConnectionSocketFactory.java:355)
    at org.apache.http.impl.conn.DefaultHttpClientConnectionOperator.connect(DefaultHttpClientConnectionOperator.java:142)
    at org.apache.http.impl.conn.PoolingHttpClientConnectionManager.connect(PoolingHttpClientConnectionManager.java:373)
    at org.apache.http.impl.execchain.MainClientExec.establishRoute(MainClientExec.java:394)
    at org.apache.http.impl.execchain.MainClientExec.execute(MainClientExec.java:237)
    at org.apache.http.impl.execchain.ProtocolExec.execute(ProtocolExec.java:185)
    at org.apache.http.impl.execchain.RetryExec.execute(RetryExec.java:89)
    at org.apache.http.impl.execchain.RedirectExec.execute(RedirectExec.java:110)
    at org.apache.http.impl.client.InternalHttpClient.doExecute(InternalHttpClient.java:185)
    at org.apache.http.impl.client.CloseableHttpClient.execute(CloseableHttpClient.java:83)
    at org.apache.http.impl.client.CloseableHttpClient.execute(CloseableHttpClient.java:108)
    at io.github.mzmine.modules.io.export_features_gnps.GNPSUtils.submitFbmnJob(GNPSUtils.java:146)
    at io.github.mzmine.modules.io.export_features_gnps.GNPSUtils.submitFbmnJob(GNPSUtils.java:93)
    at io.github.mzmine.modules.io.export_features_gnps.fbmn.GnpsFbmnExportAndSubmitTask.submit(GnpsFbmnExportAndSubmitTask.java:226)
    at io.github.mzmine.modules.io.export_features_gnps.fbmn.GnpsFbmnExportAndSubmitTask.run(GnpsFbmnExportAndSubmitTask.java:189)
    at io.github.mzmine.taskcontrol.impl.WorkerThread.run(WorkerThread.java:57)
mwang87 commented 2 years ago

nothing should have changed.

robinschmid commented 2 years ago

Just started working again