CCMS-UCSD / hpp_inspector

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USI generation bug #35

Open benpullman opened 1 year ago

benpullman commented 1 year ago

There's a bug when a mod is on the second to last amino acid of the spectrum, the closing bracket is after the final amino acid, not before it. For example: mzspec:PXD010154:01284_D01_P013188_B00_N04_R1:scan:38131:TTGIVLDSGDGVTHNVPIYEGYALPHAIM[+15.994915R]/3

benpullman commented 1 year ago

This code for converting inspect format to proforma is not in the python_ms_utilities repository, the fix should involve moving that function into that codebase.