CCNHuntLab / coins-meg

Analysis of the MEG data from the Continuous Inference task collected in the Decision Dynamics Lab at the University of Oxford
MIT License
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Update file path conventions in analysis scripts #6

Closed lhuntneuro closed 2 months ago

lhuntneuro commented 2 months ago

We have several of the main analysis scripts that have to declare paths like "basedir" etc. At the moment these explicitly declare these folders within the script, and it would be better if we made a separate python file that contains these paths, which are then imported by each of our analysis scripts.

We might also want to make use of BIDSpath (https://mne.tools/mne-bids/stable/auto_examples/bidspath.html), to reflect the fact that /ohba/pi/lhunt/coins-meg-data is a BIDS-ified directory structure, with a derivatives folder etc inside it.