search

CDCgov / MIRA

https://cdcgov.github.io/MIRA/
10 stars 1 forks source link

Single mira container #64

Open rchau88 opened 7 months ago

rchau88 commented 7 months ago

Hi Ben and Kristine,

I have cleaned-up MIRA repo and created MIRA as a single container. I had thoroughly tested it on my side, but would be super helpful to have extra eyes and checkpoints on it before merging it to prod.

Let me know if you have any questions.

Just simply pull down the repo and cd to where docker-compose.yml (pull image directly from cdcgov Dockerhub) or docker-compose-git.yml (build image directly from Github) is stored and edit the source section in the yaml file to link your dataset into the container. 

x-data-volumes:
  &data-volume
  type: bind
  source: /home/snu3/Github/FLU_SC2_SEQUENCING
  target: /data

Then run 

docker compose up -d

or 

docker compose -f docker-compose-git.yml up -d
kristinelacek commented 7 months ago

Can we possibly delay this merge for a couple weeks? I am a bit scared to merge right before a training. @nbx0

kristinelacek commented 7 months ago

I've converted to draft for the time being