CDCgov / cfa-epinow2-pipeline

https://cdcgov.github.io/cfa-epinow2-pipeline/
Apache License 2.0
10 stars 2 forks source link

Pull bulk and tail ESS warnings out of EpiNow2 fit #74

Open zsusswein opened 1 month ago

zsusswein commented 1 month ago

Sam says they look at the minimum of eff_bulk and eff_tail and pull it out over all vars. We could do this for just Rt to start, but we should probably do it for all now that we're looking at more variables.

We should also look at the per-Rt n_eff as a useful metric.

https://github.com/epiforecasts/EpiNow2/blob/2e1aa86598f13364c1af05a5a83b3ac7790db41a/R/summarise.R#L599

zsusswein commented 1 month ago

cc: @seabbs