This pull request allowed me to run the pipeline in nextflow tower without any errors related to permission denied for scripts or not being able to find the scripts being executed. Following other nf-core pipelines, I updated modules that use scripts to be executable and moved them to the bin folder if not already there.
I have tested with the profiles: docker, singularity, and bioconda.
This has also been tested on nextflow-tower.
Let me know if I can change anything to better work with the newest version of mycosnp-nf.
This pull request allowed me to run the pipeline in nextflow tower without any errors related to permission denied for scripts or not being able to find the scripts being executed. Following other nf-core pipelines, I updated modules that use scripts to be executable and moved them to the bin folder if not already there.
I have tested with the profiles: docker, singularity, and bioconda. This has also been tested on nextflow-tower.
Let me know if I can change anything to better work with the newest version of mycosnp-nf.
Thanks, CJ