CDCgov / ww-inference-model

An in-development R package and a Bayesian hierarchical model jointly fitting multiple "local" wastewater data streams and "global" case count data to produce nowcasts and forecasts of both observations
https://cdcgov.github.io/ww-inference-model/
Apache License 2.0
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Add modularity in pre-processing/stan model to vary spatial correlation functions #46

Open kaitejohnson opened 2 months ago

kaitejohnson commented 2 months ago

Goal

Want to allow users to still fit the model without a distance matrix/an assumed spatial correlation function (defaults to independence). For now, I think we can treat them as fully iid variables, but eventually we will want to explore fitting a correlation matrix without distance data using the MVN structure (and then we can compare all 3 approaches + additional spatial functions)

Requirements

Out of scope